Підписатись
Uday S. Evani
Uday S. Evani
Senior Data Scientist at New York Genome Center
Підтверджена електронна адреса в nygenome.org
Назва
Посилання
Посилання
Рік
An integrated map of genetic variation from 1,092 human genomes
1000 Genomes Project Consortium
Nature 491 (7422), 56, 2012
82502012
Genome-wide analyses identify KIF5A as a novel ALS gene
A Nicolas, KP Kenna, AE Renton, N Ticozzi, F Faghri, R Chia, ...
Neuron 97 (6), 1268-1283. e6, 2018
5792018
Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel
O Delaneau, J Marchini
Nature communications 5 (1), 3934, 2014
4352014
Haplotype-resolved diverse human genomes and integrated analysis of structural variation
P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ...
Science 372 (6537), eabf7117, 2021
4342021
High-coverage whole-genome sequencing of the expanded 1000 Genomes Project cohort including 602 trios
M Byrska-Bishop, US Evani, X Zhao, AO Basile, HJ Abel, AA Regier, ...
Cell 185 (18), 3426-3440. e19, 2022
4252022
Integrative annotation of variants from 1092 humans: application to cancer genomics
E Khurana, Y Fu, V Colonna, XJ Mu, HM Kang, T Lappalainen, A Sboner, ...
Science 342 (6154), 1235587, 2013
4232013
An integrative variant analysis suite for whole exome next-generation sequencing data
D Challis, J Yu, US Evani, AR Jackson, S Paithankar, C Coarfa, ...
BMC bioinformatics 13, 1-12, 2012
3142012
Proteomic analysis of age‐dependent changes in protein solubility identifies genes that modulate lifespan
P Reis‐Rodrigues, G Czerwieniec, TW Peters, US Evani, S Alavez, ...
Aging cell 11 (1), 120-127, 2012
1852012
Curated variation benchmarks for challenging medically relevant autosomal genes
J Wagner, ND Olson, L Harris, J McDaniel, H Cheng, A Fungtammasan, ...
Nature biotechnology 40 (5), 672-680, 2022
1232022
Benchmarking challenging small variants with linked and long reads
J Wagner, ND Olson, L Harris, Z Khan, J Farek, M Mahmoud, A Stankovic, ...
Cell Genomics 2 (5), 2022
1152022
Recent ultra-rare inherited variants implicate new autism candidate risk genes
AB Wilfert, TN Turner, SC Murali, PH Hsieh, A Sulovari, T Wang, BP Coe, ...
Nature genetics 53 (8), 1125-1134, 2021
912021
Bioinformatic tools for identifying disease gene and SNP candidates
SD Mooney, VG Krishnan, US Evani
Genetic Variation: Methods and Protocols, 307-319, 2010
752010
In silico functional profiling of human disease‐associated and polymorphic amino acid substitutions
M Mort, US Evani, VG Krishnan, KK Kamati, PH Baenziger, A Bagchi, ...
Human Mutation 31 (3), 335-346, 2010
622010
Atlas2 Cloud: a framework for personal genome analysis in the cloud
US Evani, D Challis, J Yu, AR Jackson, S Paithankar, MN Bainbridge, ...
BMC genomics 13, 1-9, 2012
492012
Integrative transcriptomic analysis of the amyotrophic lateral sclerosis spinal cord implicates glial activation and suggests new risk genes
J Humphrey, S Venkatesh, R Hasan, JT Herb, K de Paiva Lopes, ...
Nature Neuroscience 26 (1), 150-162, 2023
422023
Tor1 regulates protein solubility in Saccharomyces cerevisiae
TW Peters, MJ Rardin, G Czerwieniec, US Evani, P Reis-Rodrigues, ...
Molecular biology of the cell 23 (24), 4679-4688, 2012
332012
STOP using just GO: a multi-ontology hypothesis generation tool for high throughput experimentation
T Wittkop, E TerAvest, US Evani, KM Fleisch, AE Berman, C Powell, ...
BMC bioinformatics 14, 1-10, 2013
252013
Haplotype-resolved diverse human genomes and integrated analysis of structural variation. Science 372, eabf7117
P Ebert, PA Audano, Q Zhu, B Rodriguez-Martin, D Porubsky, MJ Bonder, ...
232021
An ontology-neutral framework for enrichment analysis
R Tirrell, U Evani, AE Berman, SD Mooney, MA Musen, NH Shah
AMIA Annual Symposium Proceedings 2010, 797, 2010
232010
Massively parallel processing of whole genome sequence data: an in-depth performance study
A Roy, Y Diao, U Evani, A Abhyankar, C Howarth, R Le Priol, T Bloom
Proceedings of the 2017 ACM International Conference on Management of Data …, 2017
152017
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