Martin Weigt

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Riccardo Zecchinaprofessor, theoretical physics, Bocconi UniversityVerified email at unibocconi.it
Andrea PagnaniProfessor at DISAT - Politecnico di Torino, and PI at the IIGMVerified email at polito.it
Hendrik SzurmantWestern University of Health SciencesVerified email at westernu.edu
Alexander K. HartmannProfessor of Physics, University of OldenburgVerified email at uol.de
Terence HwaU. C. San DiegoVerified email at ucsd.edu
Remi MonassonCNRS & Ecole Normale SupérieureVerified email at lpt.ens.fr
Alexander SchugNIC Group Leader FZ Jülich, Prof. University of Duisburg-EssenVerified email at fz-juelich.de
Jose OnuchicCTBP Rice UniversityVerified email at rice.edu
Simona CoccoVerified email at lps.ens.fr
Faruck MorcosUniversity of Texas at Dallas - Dept. Biological SciencesVerified email at utdallas.edu
Bryan J. LuntPhD Candidate, University of Illinois as Urbana-ChampaignVerified email at illinois.edu
Alfredo BraunsteinDISAT, Politecnico di TorinoVerified email at polito.it
matteo figliuzziUniversite Pierre & Marie CurieVerified email at upmc.fr
Chris SanderDana-Farber Cancer Institute, Harvard Medical School, Broad Institute, Memorial Sloan KetteringVerified email at sanderlab.org
Christoph FeinauerBocconi UniversityVerified email at unibocconi.it
Debora MarksSystems Biology, Harvard Medical SchoolVerified email at hms.harvard.edu
Pierre Barrat-CharlaixUniversität BaselVerified email at unibas.ch
Federico Ricci-TersenghiProfessor of Theoretical Physics, "La Sapienza" University, RomaVerified email at roma1.infn.it
Carlo BaldassiBocconi University; INFNVerified email at unibocconi.it
Alain BarratCNRSVerified email at cpt.univ-mrs.fr

Martin Weigt

Sorbonne Université Paris (former Université Pierre & Marie Curie)

Verified email at upmc.fr - Homepage

computational biology statistical physics biological physics statistical inference quantitative biology


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On the properties of small-world network models A Barrat, M Weigt The European Physical Journal B-Condensed Matter and Complex Systems 13 (3 …, 2000	1109	2000
Direct-coupling analysis of residue coevolution captures native contacts across many protein families F Morcos, A Pagnani, B Lunt, A Bertolino, DS Marks, C Sander, ... Proceedings of the National Academy of Sciences 108 (49), E1293-E1301, 2011	1020	2011
Identification of direct residue contacts in protein–protein interaction by message passing M Weigt, RA White, H Szurmant, JA Hoch, T Hwa Proceedings of the National Academy of Sciences 106 (1), 67-72, 2009	887	2009
Improved contact prediction in proteins: using pseudolikelihoods to infer Potts models M Ekeberg, C Lövkvist, Y Lan, M Weigt, E Aurell Physical Review E 87 (1), 012707, 2013	502	2013
Phase transitions in combinatorial optimization problems AK Hartmann, M Weigt Wiley-VCH, Weinheim, 2005	308	2005
Coloring random graphs R Mulet, A Pagnani, M Weigt, R Zecchina Physical review letters 89 (26), 268701, 2002	224	2002
Genomics-aided structure prediction JI Sułkowska, F Morcos, M Weigt, T Hwa, JN Onuchic Proceedings of the National Academy of Sciences 109 (26), 10340-10345, 2012	201	2012
Coevolutionary landscape inference and the context-dependence of mutations in beta-lactamase TEM-1 M Figliuzzi, H Jacquier, A Schug, O Tenaillon, M Weigt Molecular biology and evolution 33 (1), 268-280, 2016	177	2016
High-resolution protein complexes from integrating genomic information with molecular simulation A Schug, M Weigt, JN Onuchic, T Hwa, H Szurmant Proceedings of the National Academy of Sciences 106 (52), 22124-22129, 2009	173	2009
Structural basis of histidine kinase autophosphorylation deduced by integrating genomics, molecular dynamics, and mutagenesis AE Dago, A Schug, A Procaccini, JA Hoch, M Weigt, H Szurmant Proceedings of the National Academy of Sciences 109 (26), E1733-E1742, 2012	170	2012
Clustering by soft-constraint affinity propagation: applications to gene-expression data M Leone, M Weigt Bioinformatics 23 (20), 2708-2715, 2007	157	2007
A variational description of the ground state structure in random satisfiability problems G Biroli, R Monasson, M Weigt The European Physical Journal B-Condensed Matter and Complex Systems 14 (3 …, 2000	157	2000
Number of guards needed by a museum: A phase transition in vertex covering of random graphs M Weigt, AK Hartmann Physical review letters 84 (26), 6118, 2000	153	2000
Notch ligand delta-like 4 blockade attenuates atherosclerosis and metabolic disorders D Fukuda, E Aikawa, FK Swirski, TI Novobrantseva, V Kotelianski, ... Proceedings of the national Academy of Sciences 109 (27), E1868-E1877, 2012	146	2012
Fast and accurate multivariate Gaussian modeling of protein families: predicting residue contacts and protein-interaction partners C Baldassi, M Zamparo, C Feinauer, A Procaccini, R Zecchina, M Weigt, ... PloS one 9 (3), e92721, 2014	128	2014
Perturbation biology: inferring signaling networks in cellular systems EJ Molinelli, A Korkut, W Wang, ML Miller, NP Gauthier, X Jing, P Kaushik, ... PLoS Comput Biol 9 (12), e1003290, 2013	128	2013
From principal component to direct coupling analysis of coevolution in proteins: Low-eigenvalue modes are needed for structure prediction S Cocco, R Monasson, M Weigt PLoS Comput Biol 9 (8), e1003176, 2013	123	2013
Simplest random K-satisfiability problem F Ricci-Tersenghi, M Weigt, R Zecchina Physical Review E 63 (2), 026702, 2001	121	2001
Inverse statistical physics of protein sequences: a key issues review S Cocco, C Feinauer, M Figliuzzi, R Monasson, M Weigt Reports on Progress in Physics 81 (3), 032601, 2018	114	2018
Polynomial iterative algorithms for coloring and analyzing random graphs A Braunstein, R Mulet, A Pagnani, M Weigt, R Zecchina Physical Review E 68 (3), 036702, 2003	108	2003

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