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Aarya Venkat
Aarya Venkat
Ginkgo Bioworks
Verified email at uga.edu - Homepage
Title
Cited by
Cited by
Year
Deep evolutionary analysis reveals the design principles of fold A glycosyltransferases
R Taujale, A Venkat, LC Huang, W Yeung, K Rasheed, AS Edison, ...
eLife, eLife 2020;9:e54532, 2020
642020
Responses to 10 common criticisms of anti-racism action in STEMM
ML Gosztyla, L Kwong, NA Murray, CE Williams, N Behnke, P Curry, ...
PLoS Computational Biology 17 (7), e1009141, 2021
292021
Polymerization of the backbone of the pectic polysaccharide rhamnogalacturonan I
RA Amos, MA Atmodjo, C Huang, Z Gao, A Venkat, R Taujale, N Kannan, ...
Nature plants 8 (11), 1289-1303, 2022
152022
Quantitative analysis of the trends exhibited by the three interdisciplinary biological sciences: biophysics, bioinformatics, and systems biology
J Kang, S Park, A Venkat, A Gopinath
Journal of microbiology & biology education 16 (2), 198-202, 2015
142015
Evolution of functional diversity in the holozoan tyrosine kinome
W Yeung, A Kwon, R Taujale, C Bunn, A Venkat, N Kannan
Molecular Biology and Evolution 38 (12), 5625-5639, 2021
112021
KinOrtho: a method for mapping human kinase orthologs across the tree of life and illuminating understudied kinases
LC Huang, R Taujale, N Gravel, A Venkat, W Yeung, DP Byrne, PA Eyers, ...
BMC bioinformatics 22, 1-25, 2021
112021
Quantitative Structure–Mutation–Activity Relationship Tests (QSMART) model for protein kinase inhibitor response prediction
LC Huang, W Yeung, Y Wang, H Cheng, A Venkat, S Li, P Ma, K Rasheed, ...
BMC bioinformatics 21, 1-22, 2020
112020
Peters plus syndrome mutations affect the function and stability of human β1, 3-glucosyltransferase
A Zhang, A Venkat, R Taujale, JL Mull, A Ito, N Kannan, RS Haltiwanger
Journal of Biological Chemistry 297 (1), 2021
92021
Influence of water hardness on accumulation and effects of silver in the green alga, Raphidocelis subcapitata
A Venkat, AL Amerson, GK Bielmyer-Fraser
Georgia Journal of Science 74 (2), 5, 2016
72016
Tree visualizations of protein sequence embedding space enable improved functional clustering of diverse protein superfamilies
W Yeung, Z Zhou, L Mathew, N Gravel, R Taujale, B O’Boyle, M Salcedo, ...
Briefings in Bioinformatics 24 (1), bbac619, 2023
42023
Modularity of the hydrophobic core and evolution of functional diversity in fold A glycosyltransferases
A Venkat, D Tehrani, R Taujale, W Yeung, N Gravel, KW Moremen, ...
Journal of Biological Chemistry 298 (8), 2022
42022
PathInsight: A Novel Tool for Modeling Biomolecular Pathways
A Venkat
University of California, San Diego, 2017
32017
XAI meets Biology: A Comprehensive Review of Explainable AI in Bioinformatics Applications
Z Zhou, M Hu, M Salcedo, N Gravel, W Yeung, A Venkat, D Guo, J Zhang, ...
arXiv preprint arXiv:2312.06082, 2023
22023
Phosphorylation-dependent pseudokinase domain dimerization drives full-length MLKL oligomerization
Y Meng, SE Garnish, KA Davies, KA Black, AP Leis, CR Horne, ...
Nature Communications 14 (1), 6804, 2023
22023
Prevalence and homology of the pneumococcal serine-rich repeat protein at the global scale
J Aceil, A Venkat, E Pan, N Kannan, FY Avci
Microbiology Spectrum 11 (3), e03252-22, 2023
22023
Mechanistic and evolutionary insights into isoform-specific 'supercharging' in DCLK family kinases
A Venkat, G Watterson, DP Byrne, BO Boyle, S Shrestha, N Gravel, ...
bioRxiv, 2023.03. 29.534689, 2023
22023
GTXplorer: A portal to navigate and visualize the evolutionary information encoded in fold A glycosyltransferases
R Taujale, S Soleymani, A Priyadarshi, A Venkat, W Yeung, KJ Kochut, ...
Glycobiology 31 (11), 1472-1477, 2021
12021
Glydentify, a tool for unsupervised classification of glycosyltransferase function
A Venkat, N Kannan
GLYCOBIOLOGY 33 (11), 1065-1065, 2023
2023
Principles of Modularity in Enzyme Evolution
A Venkat
University of Georgia, 2023
2023
Redox Regulation of Brain Selective Kinases BRSK1/2: Implications for Dynamic Control of the Eukaryotic AMPK family through Cys-based mechanisms
GN Bendzunas, DP Byrne, S Shrestha, LA Daly, SO Oswald, S Katiyar, ...
bioRxiv, 2023.10. 05.561145, 2023
2023
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