Ilya Shmulevich
Ilya Shmulevich
Verified email at systemsbiology.org - Homepage
TitleCited byYear
Comprehensive molecular characterization of human colon and rectal cancer
Cancer Genome Atlas Network
Nature 487 (7407), 330, 2012
39392012
The cancer genome atlas pan-cancer analysis project
JN Weinstein, EA Collisson, GB Mills, KRM Shaw, BA Ozenberger, ...
Nature genetics 45 (10), 1113, 2013
26262013
The somatic genomic landscape of glioblastoma
CW Brennan, RGW Verhaak, A McKenna, B Campos, H Noushmehr, ...
Cell 155 (2), 462-477, 2013
23802013
Comprehensive molecular characterization of gastric adenocarcinoma
Cancer Genome Atlas Research Network
Nature 513 (7517), 202, 2014
21242014
Integrated genomic characterization of endometrial carcinoma
DA Levine, Cancer Genome Atlas Research Network
Nature 497 (7447), 67, 2013
20972013
Probabilistic Boolean networks: a rule-based uncertainty model for gene regulatory networks
I Shmulevich, ER Dougherty, S Kim, W Zhang
Bioinformatics 18 (2), 261-274, 2002
15882002
Integrated genomic characterization of papillary thyroid carcinoma
N Agrawal, R Akbani, BA Aksoy, A Ally, H Arachchi, SL Asa, JT Auman, ...
Cell 159 (3), 676-690, 2014
10822014
Genomic classification of cutaneous melanoma
R Akbani, KC Akdemir, BA Aksoy, M Albert, A Ally, SB Amin, H Arachchi, ...
Cell 161 (7), 1681-1696, 2015
10492015
The molecular taxonomy of primary prostate cancer
A Abeshouse, J Ahn, R Akbani, A Ally, S Amin, CD Andry, M Annala, ...
Cell 163 (4), 1011-1025, 2015
9642015
From Boolean to probabilistic Boolean networks as models of genetic regulatory networks
I Shmulevich, ER Dougherty, W Zhang
Proceedings of the IEEE 90 (11), 1778-1792, 2002
5502002
The immune landscape of cancer
V Thorsson, DL Gibbs, SD Brown, D Wolf, DS Bortone, THO Yang, ...
Immunity 48 (4), 812-830. e14, 2018
4322018
Comprehensive and integrative genomic characterization of hepatocellular carcinoma
A Ally, M Balasundaram, R Carlsen, E Chuah, A Clarke, N Dhalla, RA Holt, ...
Cell 169 (7), 1327-1341. e23, 2017
4292017
Comprehensive characterization of cancer driver genes and mutations
MH Bailey, C Tokheim, E Porta-Pardo, S Sengupta, D Bertrand, ...
Cell 173 (2), 371-385. e18, 2018
4012018
Association of BRCA1 and BRCA2 mutations with survival, chemotherapy sensitivity, and gene mutator phenotype in patients with ovarian cancer
D Yang, S Khan, Y Sun, K Hess, I Shmulevich, AK Sood, W Zhang
Jama 306 (14), 1557-1565, 2011
3922011
Gene perturbation and intervention in probabilistic Boolean networks
I Shmulevich, ER Dougherty, W Zhang
Bioinformatics 18 (10), 1319-1331, 2002
3222002
Oncogenic signaling pathways in the cancer genome atlas
F Sanchez-Vega, M Mina, J Armenia, WK Chatila, A Luna, KC La, ...
Cell 173 (2), 321-337. e10, 2018
3212018
Integrated analyses identify a master microRNA regulatory network for the mesenchymal subtype in serous ovarian cancer
D Yang, Y Sun, L Hu, H Zheng, P Ji, CV Pecot, Y Zhao, S Reynolds, ...
Cancer cell 23 (2), 186-199, 2013
3172013
Cell-of-origin patterns dominate the molecular classification of 10,000 tumors from 33 types of cancer
KA Hoadley, C Yau, T Hinoue, DM Wolf, AJ Lazar, E Drill, R Shen, ...
Cell 173 (2), 291-304. e6, 2018
2822018
Function of C/EBPδ in a regulatory circuit that discriminates between transient and persistent TLR4-induced signals
V Litvak, SA Ramsey, AG Rust, DE Zak, KA Kennedy, AE Lampano, ...
Nature immunology 10 (4), 437, 2009
2802009
Activities and sensitivities in Boolean network models
I Shmulevich, SA Kauffman
Physical review letters 93 (4), 048701, 2004
2632004
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Articles 1–20