Aleksandra A Kolodziejczyk
Aleksandra A Kolodziejczyk
Marie Curie Postdoctoral Fellow at Weizmann Institute of Science
Verified email at weizmann.ac.il
TitleCited byYear
Accounting for technical noise in single-cell RNA-seq experiments
P Brennecke, S Anders, JK Kim, AA Kołodziejczyk, X Zhang, V Proserpio, ...
Nature methods 10 (11), 1093, 2013
4502013
The technology and biology of single-cell RNA sequencing
AA Kolodziejczyk, JK Kim, V Svensson, JC Marioni, SA Teichmann
Molecular cell 58 (4), 610-620, 2015
3462015
Single cell RNA-sequencing of pluripotent states unlocks modular transcriptional variation
AA Kolodziejczyk, JK Kim, JCH Tsang, T Ilicic, J Henriksson, ...
Cell stem cell 17 (4), 471-485, 2015
1892015
Dysbiosis and the immune system
M Levy, AA Kolodziejczyk, CA Thaiss, E Elinav
Nature Reviews Immunology 17 (4), 219, 2017
1532017
Classification of low quality cells from single-cell RNA-seq data
T Ilicic, JK Kim, AA Kolodziejczyk, FO Bagger, DJ McCarthy, JC Marioni, ...
Genome biology 17 (1), 29, 2016
1172016
Single-cell RNA sequencing reveals T helper cells synthesizing steroids de novo to contribute to immune homeostasis
B Mahata, X Zhang, AA Kolodziejczyk, V Proserpio, L Haim-Vilmovsky, ...
Cell reports 7 (4), 1130-1142, 2014
1072014
Characterizing noise structure in single-cell RNA-seq distinguishes genuine from technical stochastic allelic expression
JK Kim, AA Kolodziejczyk, T Ilicic, SA Teichmann, JC Marioni
Nature communications 6, 8687, 2015
992015
Aging increases cell-to-cell transcriptional variability upon immune stimulation
CP Martinez-Jimenez, N Eling, HC Chen, CA Vallejos, AA Kolodziejczyk, ...
Science 355 (6332), 1433-1436, 2017
632017
Single-cell transcriptomic reconstruction reveals cell cycle and multi-lineage differentiation defects in Bcl11a-deficient hematopoietic stem cells
JCH Tsang, Y Yu, S Burke, F Buettner, C Wang, AA Kolodziejczyk, ...
Genome biology 16 (1), 178, 2015
602015
Bile acids in glucose metabolism in health and disease
H Shapiro, AA Kolodziejczyk, D Halstuch, E Elinav
Journal of Experimental Medicine 215 (2), 383-396, 2018
262018
Establishment of mouse expanded potential stem cells
J Yang, DJ Ryan, W Wang, JCH Tsang, G Lan, H Masaki, X Gao, ...
Nature 550 (7676), 393, 2017
242017
Flipping between Polycomb repressed and active transcriptional states introduces noise in gene expression
G Kar, JK Kim, AA Kolodziejczyk, KN Natarajan, ET Triglia, B Mifsud, ...
Nature communications 8 (1), 36, 2017
202017
Single cell transcriptomics of pluripotent stem cells: reprogramming and differentiation
KN Natarajan, SA Teichmann, AA Kolodziejczyk
Current opinion in genetics & development 46, 66-76, 2017
72017
Global and targeted approaches to single-cell transcriptome characterization
AA Kolodziejczyk, T Lönnberg
Briefings in functional genomics 17 (4), 209-219, 2017
32017
The role of the microbiome in NAFLD and NASH
AA Kolodziejczyk, D Zheng, O Shibolet, E Elinav
EMBO molecular medicine 11 (2), e9302, 2019
2019
# AStemCellScientistBecause
A Bond, S Haas, C Galonska, F D'Addio, L Hamilton, L Ho, M Iwasaki, ...
CELL STEM CELL 17 (4), 381-384, 2015
2015
Dynamic transitions in gene expression states during neuronal differentiation
ET Triglia, C Ferrai, A Piccolo, T Rito, AA Kolodziejczyk, G Kar, I Jaeger, ...
FEBS JOURNAL 282, 87-87, 2015
2015
BBF RFC XX: miMeasure–a standard for miRNA binding site characterization in mammalian cells
L Adlung, J Al Sabah, P Bayer, R Berrens, E Cristiano, L Flocke, ...
2010
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