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Jerome de Ruyck
Jerome de Ruyck
UGSF - Université de Lille
Подтвержден адрес электронной почты в домене univ-lille.fr - Главная страница
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Год
Molecular docking as a popular tool in drug design, an in silico travel
J De Ruyck, G Brysbaert, R Blossey, MF Lensink
Advances and Applications in Bioinformatics and Chemistry, 1-11, 2016
3602016
3, 6-Disubstituted coumarins as mechanism-based inhibitors of thrombin and factor Xa
R Frédérick, S Robert, C Charlier, J de Ruyck, J Wouters, B Pirotte, ...
Journal of medicinal chemistry 48 (24), 7592-7603, 2005
832005
The Antiadhesive Strategy in Crohn′s Disease: Orally Active Mannosides to Decolonize Pathogenic Escherichia coli from the Gut
D Alvarez Dorta, A Sivignon, T Chalopin, TI Dumych, G Roos, RO Bilyy, ...
ChemBioChem 17 (10), 936-952, 2016
612016
Towards the understanding of the absorption spectra of NAD (P) H/NAD (P)+ as a common indicator of dehydrogenase enzymatic activity
J De Ruyck, M Famerée, J Wouters, EA Perpète, J Preat, D Jacquemin
Chemical Physics Letters 450 (1-3), 119-122, 2007
522007
How the second-order nonlinear optical response of the collagen triple helix appears: a theoretical investigation
M de Wergifosse, J de Ruyck, B Champagne
The Journal of Physical Chemistry C 118 (16), 8595-8602, 2014
372014
Structure of Thermus thermophilus type 2 isopentenyl diphosphate isomerase inferred from crystallography and molecular dynamics
J de Ruyck, SC Rothman, CD Poulter, J Wouters
Biochemical and biophysical research communications 338 (3), 1515-1518, 2005
372005
Signal transduction by BvgS sensor kinase: binding of modulator nicotinate affects the conformation and dynamics of the entire periplasmic moiety
E Dupré, E Lesne, J Guérin, MF Lensink, A Verger, J De Ruyck, ...
Journal of Biological Chemistry 290 (38), 23307-23319, 2015
282015
Crystal Structure of Type 2 Isopentenyl Diphosphate Isomerase from Thermus thermophilus in Complex with Inorganic Pyrophosphate
J De Ruyck, J Pouyez, SC Rothman, D Poulter, J Wouters
Biochemistry 47 (35), 9051-9053, 2008
282008
Targeting dynamical binding processes in the design of non-antibiotic anti-adhesives by molecular simulation—The example of FimH
EM Krammer, J De Ruyck, G Roos, J Bouckaert, MF Lensink
Molecules 23 (7), 1641, 2018
262018
Structures of C-mannosylated anti-adhesives bound to the type 1 fimbrial FimH adhesin
J De Ruyck, MF Lensink, J Bouckaert
IUCrJ 3 (3), 163-167, 2016
252016
Structural role for Tyr-104 in Escherichia coli isopentenyl-diphosphate isomerase: site-directed mutagenesis, enzymology, and protein crystallography
J De Ruyck, V Durisotti, Y Oudjama, J Wouters
Journal of Biological Chemistry 281 (26), 17864-17869, 2006
232006
Analysis of the Interactions Taking Place in the Recognition Site of a Bimetallic Mg (II)− Zn (II) Enzyme, Isopentenyl Diphosphate Isomerase. A Parallel Quantum-Chemical and …
N Gresh, N Audiffren, JP Piquemal, J De Ruyck, M Ledecq, J Wouters
The Journal of Physical Chemistry B 114 (14), 4884-4895, 2010
222010
Identification of Key Residues in Proteins Through Centrality Analysis and Flexibility Prediction with RINspector
G Brysbaert, T Mauri, J de Ruyck, MF Lensink
Current Protocols in Bioinformatics, e66, 2018
202018
Structure‐Based Design and Synthesis of Piperidinol‐Containing Molecules as New Mycobacterium abscessus Inhibitors
J De Ruyck, C Dupont, E Lamy, V Le Moigne, C Biot, Y Guérardel, ...
ChemistryOpen 9 (3), 351-365, 2020
192020
Structure-based drug design targeting biosynthesis of isoprenoids: a crystallographic state of the art of the involved enzymes
J de Ruyck, J Wouters
Current Protein and Peptide Science 9 (2), 117-137, 2008
192008
Inhibition studies on enzymes involved in isoprenoid biosynthesis. Focus on two potential drug targets: dxr and idi-2 enzymes
J de Ruyck, J Wouters, CD Poulter
Current enzyme inhibition 7 (2), 79-95, 2011
182011
Physiochemical Tuning of Potent Escherichia coli Anti‐Adhesives by Microencapsulation and Methylene Homologation
D Alvarez Dorta, T Chalopin, A Sivignon, J De Ruyck, TI Dumych, ...
ChemMedChem 12 (12), 986-998, 2017
152017
Molecular docking as a popular tool in drug design, an in silico travel. Adv Appl Bioinform Chem. 2016; 9: 1-11
J De Ruyck, G Brysbaert, R Blossey, MF Lensink
15
Direct interaction of TrkA/CD44v3 is essential for NGF-promoted aggressiveness of breast cancer cells
S Trouvilliez, J Cicero, R Lévêque, L Aubert, C Corbet, A Van Outryve, ...
Journal of experimental & clinical cancer research 41 (1), 110, 2022
122022
Determination of kinetics and the crystal structure of a novel type 2 isopentenyl diphosphate: dimethylallyl diphosphate isomerase from Streptococcus pneumoniae
J De Ruyck, MW Janczak, SS Neti, SC Rothman, HL Schubert, ...
Chembiochem 15 (10), 1452-1458, 2014
122014
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