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Yupeng Wang
Yupeng Wang
Bioinformatics & Data Scientist, BDX Research & Consulting
Verified email at bdxconsult.com
Title
Cited by
Cited by
Year
MCScanX: a toolkit for detection and evolutionary analysis of gene synteny and collinearity
Y Wang, H Tang, JD DeBarry, X Tan, J Li, X Wang, T Lee, H Jin, B Marler, ...
Nucleic Acids Research, 2012
43112012
The tomato genome sequence provides insights into fleshy fruit evolution
S Sato, S Tabata, H Hirakawa, E Asamizu, K Shirasawa, S Isobe, ...
Nature 485 (7400), 635-641, 2012
31862012
The genome of the mesopolyploid crop species Brassica rapa
X Wang, H Wang, J Wang, R Sun, J Wu, S Liu, Y Bai, JH Mun, I Bancroft, ...
Nature Genetics 43 (10), 1035-1039, 2011
20972011
The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes
S Liu, Y Liu, X Yang, C Tong, D Edwards, IAP Parkin, M Zhao, J Ma, J Yu, ...
Nature communications 5 (1), 3930, 2014
11302014
Genome and gene duplications and gene expression divergence: a view from plants
Y Wang, X Wang, AH Paterson
Annals of the New York Academy of Sciences, 2011
1982011
Modes of gene duplication contribute differently to genetic novelty and redundancy, but show parallels across divergent angiosperms
Y Wang, X Wang, H Tang, X Tan, SP Ficklin, FA Feltus, AH Paterson
PloS one 6 (12), e28150, 2011
1572011
AntEpiSeeker: detecting epistatic interactions for case-control studies using a two-stage ant colony optimization algorithm
Y Wang, X Liu, K Robbins, R Rekaya
BMC research notes 3, 1-8, 2010
1552010
MCScanX-transposed: detecting transposed gene duplications based on multiple colinearity scans
Y Wang, J Li, AH Paterson
Bioinformatics 29 (11), 1458-1460, 2013
1322013
Correlation of mRNA and protein abundance in the developing maize leaf
L Ponnala, Y Wang, Q Sun, KJ van Wijk
The Plant Journal 78 (3), 424-440, 2014
1242014
Different patterns of gene structure divergence following gene duplication in Arabidopsis
Y Wang, X Tan, AH Paterson
BMC genomics 14, 1-9, 2013
762013
Gene body methylation shows distinct patterns associated with different gene origins and duplication modes and has a heterogeneous relationship with gene expression in Oryza …
Y Wang, X Wang, TH Lee, S Mansoor, AH Paterson
New Phytologist 198 (1), 274-283, 2013
622013
LSOSS: detection of cancer outlier differential gene expression
Y Wang, R Rekaya
Biomarker insights 5, BMI. S5175, 2010
322010
Common genetic causes of holoprosencephaly are limited to a small set of evolutionarily conserved driver genes of midline development coordinated by TGF‐β, hedgehog, and FGF …
E Roessler, P Hu, J Marino, S Hong, R Hart, S Berger, A Martinez, Y Abe, ...
Human Mutation 39 (10), 1416-1427, 2018
292018
Update of KDBI: kinetic data of bio-molecular interaction database
P Kumar, BC Han, Z Shi, J Jia, YP Wang, YT Zhang, L Liang, QF Liu, ZL Ji, ...
Nucleic acids research 37 (suppl 1), D636-D641, 2009
282009
Large-scale gene relocations following an ancient genome triplication associated with the diversification of core eudicots
Y Wang, SP Ficklin, X Wang, FA Feltus, AH Paterson
PLoS One 11 (5), e0155637, 2016
232016
A comprehensive analysis of gene expression evolution between humans and mice
Y Wang, R Rekaya
Evolutionary bioinformatics 5, EBO. S2874, 2009
222009
Locally Duplicated Ohnologs Evolve Faster Than Nonlocally Duplicated Ohnologs in Arabidopsis and Rice
Y Wang
Genome biology and evolution 5 (2), 362-369, 2013
202013
A computational framework for predicting obesity risk based on optimizing and integrating genetic risk score and gene expression profiles
PV Joseph, Y Wang, NH Fourie, WA Henderson
PLoS One 13 (5), e0197843, 2018
192018
Finding the sources of missing heritability within rare variants through simulation
B Bandyopadhyay, V Chanda, Y Wang
Bioinformatics and biology insights 11, 1177932217735096, 2017
182017
Aberrant splicing induced by the most common EPG5 mutation in an individual with Vici syndrome
MS Kane, T Vilboux, LA Wolfe, PR Lee, Y Wang, KC Huddleston, ...
Brain 139 (9), e52-e52, 2016
162016
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