Sofia Robb
Sofia Robb
Verified email at stowers.org
Title
Cited by
Cited by
Year
MAKER: an easy-to-use annotation pipeline designed for emerging model organism genomes
BL Cantarel, I Korf, SMC Robb, G Parra, E Ross, B Moore, C Holt, ...
Genome research 18 (1), 188-196, 2008
11632008
SmedGD: the Schmidtea mediterranea genome database
SMC Robb, E Ross, AS Alvarado
Nucleic acids research 36 (suppl_1), D599-D606, 2007
3132007
The Schmidtea mediterranea database as a molecular resource for studying platyhelminthes, stem cells and regeneration
AS Alvarado, PA Newmark, SMC Robb, R Juste
Development 129 (24), 5659-5665, 2002
2712002
The sea lamprey germline genome provides insights into programmed genome rearrangement and vertebrate evolution
JJ Smith, N Timoshevskaya, C Ye, C Holt, MC Keinath, HJ Parker, ...
Nature genetics 50 (2), 270-277, 2018
1392018
SmedGD 2.0: The Schmidtea mediterranea genome database
SMC Robb, K Gotting, E Ross, A Sánchez Alvarado
genesis 53 (8), 535-546, 2015
1092015
The Monarch Initiative in 2019: an integrative data and analytic platform connecting phenotypes to genotypes across species
KA Shefchek, NL Harris, M Gargano, N Matentzoglu, D Unni, M Brush, ...
Nucleic acids research 48 (D1), D704-D715, 2020
452020
Identification of immunological reagents for use in the study of freshwater planarians by means of whole‐mount immunofluorescence and confocal microscopy
SMC Robb, AS Alvarado
genesis 32 (4), 293-298, 2002
452002
Embryonic origin of adult stem cells required for tissue homeostasis and regeneration
EL Davies, K Lei, CW Seidel, AE Kroesen, SA McKinney, L Guo, ...
Elife 6, e21052, 2017
432017
The use of RelocaTE and unassembled short reads to produce high-resolution snapshots of transposable element generated diversity in rice
SMC Robb, L Lu, E Valencia, JM Burnette III, Y Okumoto, SR Wessler, ...
G3: Genes, Genomes, Genetics 3 (6), 949-957, 2013
382013
Phylogenetic and Phylogenomic Definition of Rhizopus Species
AP Gryganskyi, J Golan, S Dolatabadi, S Mondo, S Robb, A Idnurm, ...
G3: Genes, Genomes, Genetics 8 (6), 2007-2018, 2018
322018
Histone modifications and regeneration in the planarian Schmidtea mediterranea
SMC Robb, AS Alvarado
Current topics in developmental biology 108, 71-93, 2014
272014
Managing biological databases
A Sanchez, S Robb
US Patent 8,108,384, 2012
272012
Managing biological databases
A Sanchez, S Robb
US Patent 8,108,384, 2012
272012
Tracking the genome-wide outcomes of a transposable element burst over decades of amplification
L Lu, J Chen, SMC Robb, Y Okumoto, JE Stajich, SR Wessler
Proceedings of the National Academy of Sciences 114 (49), E10550-E10559, 2017
232017
Changes in regeneration-responsive enhancers shape regenerative capacities in vertebrates
W Wang, CK Hu, A Zeng, D Alegre, D Hu, K Gotting, AO Granillo, Y Wang, ...
Science 369 (6508), 2020
212020
Cellular, ultrastructural and molecular analyses of epidermal cell development in the planarian Schmidtea mediterranea
LC Cheng, KC Tu, CW Seidel, SMC Robb, F Guo, AS Alvarado
Developmental biology 433 (2), 357-373, 2018
132018
Hands-on classroom activities for exploring regeneration and stem cell biology with planarians
A Accorsi, MM Williams, EJ Ross, SMC Robb, SA Elliott, KC Tu, ...
The American Biology Teacher 79 (3), 208-223, 2017
132017
Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report
N Matentzoglu, J Balhoff, S Bello, C Boerkoel, Y Bradford, L Carmody, ...
52018
Functional studies of regeneration in the planarian Schmidtea mediterranea.
AS Alvarado, PW Reddien, A Bermange, N Oviedo, SMC Robb
Developmental Biology 259 (2), 525-525, 2003
52003
Genomic diversity generated by a transposable element burst in a rice recombinant inbred population
J Chen, L Lu, SMC Robb, M Collin, Y Okumoto, JE Stajich, SR Wessler
Proceedings of the National Academy of Sciences 117 (42), 26288-26297, 2020
32020
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Articles 1–20